logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002525_18|CGC2

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002525_04017
Pectate disaccharide-lyase
CAZyme 39300 40997 + PL2| PL2_2
MGYG000002525_04018
Lactose transport system permease protein LacF
TC 41038 41928 + 3.A.1.1.11
MGYG000002525_04019
L-arabinose transport system permease protein AraQ
TC 41921 42841 + 3.A.1.1.11
MGYG000002525_04020
Trehalose import ATP-binding protein SugC
TC 42855 43982 + 3.A.1.1.11
MGYG000002525_04021
Putative ABC transporter substrate-binding protein YesO
TC 43998 45287 + 3.A.1.1.11
MGYG000002525_04022
Oligogalacturonate-specific porin KdgM
TC 45598 46296 + 1.B.35.1.1
MGYG000002525_04023
Inner membrane protein YdjM
null 46577 47125 + YdjM
MGYG000002525_04024
L-cystine uptake protein TcyP
TC 47343 48734 + 2.A.23.1.8
MGYG000002525_04025
N-acetylmuramoyl-L-alanine amidase AmiD
null 48841 49692 - Amidase_2| PG_binding_1
MGYG000002525_04026
Pectin degradation repressor protein KdgR
TF 50038 50829 - TrmB
MGYG000002525_04027
Oligogalacturonate lyase
CAZyme 51016 52182 - PL22| PL22_1
MGYG000002525_04028
Riboflavin transporter RibZ
TC 52468 53835 + 2.A.1.3.17
MGYG000002525_04029
Protease HtpX
TC 53900 54781 - 9.B.1.1.6
MGYG000002525_04030
Tail-specific protease
TC 55091 57151 - 9.B.174.1.2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002525_04017 PL2_e0|4.2.2.9 pectin
MGYG000002525_04027 PL22_e0|4.2.2.6 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location